run those commands to setup permissions for both apache2 and cli commands,

so you can run cache:clear command or remove app/cache/dev or app/cache/prod directories without subsequent problems with permission denied errors

HTTPDUSER=`ps aux | grep -E '[a]pache|[h]ttpd|[_]www|[w]ww-data|[n]ginx' | grep -v root | head -1 | cut -d\  -f1`
sudo setfacl -R -m u:"$HTTPDUSER":rwX -m u:`whoami`:rwX app/cache app/logs
sudo setfacl -dR -m u:"$HTTPDUSER":rwX -m u:`whoami`:rwX app/cache app/logs